BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013D03LP1|AL426505
(860 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig792 1697 0.0
>3x_Contig792
Length = 2203
Score = 1697 bits (856), Expect = 0.0
Identities = 859/860 (99%)
Strand = Plus / Plus
Query: 1 atcattcggcatttgaggcattatggaactcatatacaatcaaaatatgtgctgatgggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1211 atcattcggcatttgaggcattatggaactcatatacaatcaaaatatgtgctgatgggg 1270
Query: 61 ctgccaatcgattattcgattattatcgtgatagcgatggtaagaggtatcaccccgacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1271 ctgccaatcgattattcgattattatcgtgatagcgatggtaagaggtatcaccccgacg 1330
Query: 121 taattgcaggtgacatggattcaattagggaagacgtacttgaatattatgaagcaatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1331 taattgcaggtgacatggattcaattagggaagacgtacttgaatattatgaagcaatag 1390
Query: 181 aaacaaccacagttattaagcaaaacacgcaatattccacagattttaccaagagcgtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1391 aaacaaccacagttattaagcaaaacacgcaatattccacagattttaccaagagcgtca 1450
Query: 241 atgttgccactttgttgctattgggcatcgacttgaatgcagttgaaatcaatgagtatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1451 atgttgccactttgttgctattgggcatcgacttgaatgcagttgaaatcaatgagtatg 1510
Query: 301 atggaattcataagctataccaacaggccgataaaagccaattgaaagatataccattac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1511 atggaattcataagctataccaacaggccgataaaagccaattgaaagatataccattac 1570
Query: 361 ttatcctaaatggtattgatggcagattcgatcataccatacattccatggtacaatttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1571 ttatcctaaatggtattgatggcagattcgatcataccatacattccatggtacaatttt 1630
Query: 421 acgctttacggcgtcaggacccgtactttaaaatgtgttttttaactatgagtgatatga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1631 acgctttacggcgtcaggacccgtactttaaaatgtgttttttaactatgagtgatatga 1690
Query: 481 tcatcctcatcccatcctccaaaaaaggatactggttgaaactagacaaagtcaagccat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1691 tcatcctcatcccatcctccaaaaaaggatactggttgaaactagacaaagtcaagccat 1750
Query: 541 tgattgggaactgtggattactgccactagccgggccaaacataataaccaagactaaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1751 tgattgggaactgtggattactgccactagccgggccaaacataataaccaagactaaag 1810
Query: 601 gtttgaaatgggatgttgaagactggcccacaagtattgaaagtggtaatgtcagcagca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1811 gtttgaaatgggatgttgaagactggcccacaagtattgaaagtggtaatgtcagcagca 1870
Query: 661 gttatcggttcgtgggagaaaactgcctgattgcctgcgaagagtcaattgtgatgagcg 720
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1871 gtaatcggttcgtgggagaaaactgcctgattgcctgcgaagagtcaattgtgatgagcg 1930
Query: 721 tcgaactgaaatgggataaaataacgcagcatttgatagatgaatcggagtaagtatgta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1931 tcgaactgaaatgggataaaataacgcagcatttgatagatgaatcggagtaagtatgta 1990
Query: 781 tataagtgataccgagtagacattctaattttaatttgaagaaagaaggcaagtggtgct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1991 tataagtgataccgagtagacattctaattttaatttgaagaaagaaggcaagtggtgct 2050
Query: 841 gctttttgccttgataggct 860
||||||||||||||||||||
Sbjct: 2051 gctttttgccttgataggct 2070
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6319
Number of Sequences: 1807
Number of extensions: 6319
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 860
length of database: 10,358,551
effective HSP length: 16
effective length of query: 844
effective length of database: 10,329,639
effective search space: 8718215316
effective search space used: 8718215316
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)